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ITCWeb: u001.unix.resources



   U-001, UNIX RESOURCE LIST

   This is  a  publication  of  Information  Technology  and  Communication,
   University  of  Virginia,  Charlottesville,  VA,  copyright 1995.  Please
   credit UVa, ITC, and the author when referring  to  and/or  copying  this
   publication for your own purposes.

   This ITC publication  was  designed  to  be  displayed  on-line  using  a
   monospace font such as Courier.





          TITLE:  Unix Resource List              DOCUMENT NO:  U-001

          DATE:  November 21, 1997                VERSION NO: 8

   INTRODUCTION

        This document contains brief descriptions of sources of  information
   that  will help you find your way around the computers that run a version
   of the Unix operating system. It also contains a list of many of the com-
   mands and third-party software available on the systems supported by ITC.


   ACCOUNTS

        Accounts on Unix machines may be obtained by sending electronic mail
   to  accounts@virginia.edu  or  by completing Form 39-B, ``Application for
   University Grant Computing Account.'' This form is available at the  User
   Accounting window at ITC's office in Wilson 234.  Alternately, an account
   can be created overnight by filling out the  form  on  the  web  page  at
   http://www.itc.virginia.edu/accounts

        There are a number of computers running the Unix operating system at
   UVa,  including RS/6000 (AIX) and Sun (Solaris) servers and workstations,
   Silicon Graphics (IRIX) and NeXT (Mach)  workstations.   For  information
   about Supercomputing capabilities, contact res-consult@Virginia.EDU.  The
   table below lists the names of ITC's public Unix computers.
























   U-001                      Unix Resource List                           2

                              UNIX COMPUTER NAMES
                         (All names must be appended.)
      ___________________________________________________________________
          Append                             Append
       .virginia.edu                  .unixlab.virginia.edu
      ___________________________________________________________________
         RS/6000                     Sun                        SGI
          (AIX)                   (Solaris)                    IRIX
      ___________________________________________________________________
      avery.med        sparc4-1,sparc4-2...sparc4-6*      sgi-crimson
      blue.unix          (Small Bldg.)                      (Small Bldg.)
      curry.edschool   sunipc-1...sunipc-13**             sgi-1...sgi-9
      hobbes.itc         (Small Bldg.)                      (Small Bldg.)
      poe.acc          sunipc-31...sunipc-37**
      watt.seas            (Thornton E225)
                       sparc20-1,sparc20-2,sparc20-3***




     * color SPARCstation 4s with Sun-4 architecture
    ** color SPARCstation IPCs with Sun-4 architecture.
   *** SPARC-20 Servers running Solaris 2.5.1
      Note that some programs that worked on the Sun-4 may not work yet
      for Solaris.



   CONSULTING

        There are ITC Unix consultants available to help  users  with  ques-
   tions  related to the Unix operating system and with some of the programs
   that run on the Unix computers, including the FORTRAN, C, C++ and  Pascal
   compilers.   The ITC Help Desk (924-3731) in Wilson 235 is open from 8:00
   a.m. to 5:00 p.m.,  Monday-Friday.   Student  consultants  will  also  be
   available  in the Small 102 and Thornton E225 Unix labs during the posted
   hours (check GWIS, the Grounds-Wide Information System, for hours).   The
   phone number for the Small Hall lab is 924-1484, and the phone number for
   the Thornton A225 lab is 924-6104.  Feel free to call or stop by  if  you
   have any questions.


   SHORT COURSES

        A series of free non-credit short courses are offered at the  begin-
   ning  of  each  semester  and during the summer session to members of the
   University community.  These courses are  offered  in  the  afternoon  or
   evening  and  last approximately two hours.  A brochure of class descrip-
   tions and the schedule is available at the  beginning  of  each  semester
   from  the ITC Help Desk in Wilson 235.  The courses are also announced in
   ITC's InTerConnection's Newsletter, through on-line news available on all
   computer systems and via GWIS, described below.


   EDITORS

        ITC supports the full-screen editors Pico, JOVE (Jonathan's Own Ver-
   sion  of  Emacs) and Vi (vee-eye, short for visual).  The biggest differ-
   ence between them is that Vi has two modes, input and command;  JOVE  and
   pico  have  one mode, meaning that anything that is typed becomes part of




   U-001                      Unix Resource List                           3

   your file except the special key sequences that make  up  commands.   Tu-
   torials   on   JOVE,  pico,   and  Vi  can  be  found  in  the  directory
   /help/tutorials.  You can pick up printed copies from the ITC  Help  Desk
   in Wilson 235 and in the public Unix labs in Small 102 and Thornton E225.
   Other documentation for these editors is listed in the ``UVa  Documents''
   section below.


   DOCUMENTATION

   On-Line Help

        There is a menu-driven help command on the RS/6000  computers  which
   is  a good place to start looking for help.  The program gives details on
   other sources of help.  Just type help at a Unix prompt to start the help
   program.

        You  can  send  questions  via  electronic  mail  to   the   address
   consult@virginia.edu and suggestions to suggest@virginia.edu.

        On-line help is also available with the man command on all computers
   running  Unix.   The  table  below gives examples of the command.  (NOTE:
   Whenever  is used in this document, the Return or Enter  key  on  the
   keyboard should be pressed.)


             _____________________________________________________
             |     Command                     Result             |
             |____________________________________________________|
             |man man          Returns information about the  |
             |                     man command.                   |
             |                                                    |
             |man -k keyword   Returns information on any     |
             |                     commands whose description     |
             |                     contains keyword.              |
             |                                                    |
             |man command      Returns the on-line manual     |
             |                     pages about command.  Scroll   |
             |                     through the pages with the     |
             |                     space bar.  Quit with q or     |
             |                     CONTROL-C.                     |
             |____________________________________________________|


   GWIS

        GWIS (Grounds-Wide Information System, pronounced ``gee-whiz'') pro-
   vides  access to a wealth of information both from UVa and the world-wide
   Internet.  To use GWIS, type gwis at the Unix prompt, or xgwis for the  X
   Windows  version.  The Unix Documentation produced by User Support of ITC
   and listed below is accessible from GWIS.

        To read the Unix documents with GWIS, or even do keyword searches of
   the  documents,  invoke  GWIS  with gwis.  Starting at the first menu and
   continuing into submenus, select

       Computing and Communications
         Documents
           Unix Documents





   U-001                      Unix Resource List                           4

   Exit GWIS by typing q at any time.

   Manuals

        Unix manuals are available in manual racks in  the  following  loca-
   tions:

         Albert H. Small Building, 102 (Unix facility)
         Cocke Hall, 115 (Microcomputer facility)
         Wilson Hall, 235 (ITC Help Desk)
         Olsson Hall, 018 (Microcomputer facility)
         Thornton Hall A233 (Stacks microcomputer facility)
         Thornton Hall E225 (Unix facility)



   UVa Documents

        Documentation produced by the User Support Division of ITC is avail-
   able from the ITC Help Desk in Wilson 235 or from Professor Publishing in
   the University Bookstore.

   The following documents are available from Wilson 235. Some documents are
   also available in the various public labs.


        U-001     Unix Resource List (this document)
        U-001A    Using UVa's Unix Menu System [Umenu]
        U-002     Introduction to the Unix Operating System
        U-003     JOVE Text Editor on the RS/6000 or Sun Computer
        U-004     Vi Text Editor
        U-010     Unix Mail Overview
        U-010A    A Primer for Mail on RS/6000 Computers (MUSH)
        U-010B    A Primer for Unix Mail on the Suns
        U-010C    The Elm Users Guide
        U-010E    The Elm Filter System Guide
        U-010F    The Elm Alias System Users Guide
        U-010G    Elm Forms Mode Guide
        U-011     USENET News
        U-011A    USENET News: Using Kill Files
        U-014     Introduction to the X Window System
        U-014A    More About X Windows
        U-015     Using FORTRAN on the RS/6000
        U-016     Using C/C++ on the RS/6000
        U-017     Using NAG on the RS/6000
        U-018     Using IMSL on the RS/6000
        U-019     Using NCAR Graphics on the RS/6000
        U-021     An Electronic Gradebook Package
        U-022     TS: A Test-Scoring Program
        U-024     SPSS on the RS/6000
        U-025     SAS on the RS/6000
        U-027     Introduction to the InfoExplorer
        U-028     Introduction to Vectorization
        U-029     Using DBX on the RS/6000
        U-030     Using the Unix Tape Input and Mass Storage System
        U-031     The ICPSR Data Collection
        U-032     LaTeX: A Document Preparation System
        U-033     Accessing CRSP Data
        U-034     Accessing Compustat Data





   U-001                      Unix Resource List                           5

   The following documents can be purchased from University Bookstore:


        U-003A    JOVE Reference Manual
        U-004A    Vi on Unix Systems
        U-005     Nroff, Troff and Psroff (Unix Text Formatting)
        U-005A    The -me Macro Package (Unix Text Formatting)
        U-005B    Introduction to the MM Macro Package (Unix Text Formatting)
        U-006     TBL - A Program to Format Tables
        U-007     EQN - Typesetting Mathematics: User's Guide
        U-008     PIC - A Graphics Language for Typesetting: User Manual
        U-009     GRAP - A Language for Typesetting Graphs: Tutorial and User Manual
        U-012     Catalog of PostScript Fonts
        U-013     PSFIG - How to Include PostScript Figures into a LaTeX or Troff Document


   All of these documents are also available on "hints", under "docs".


   Books

        There are numerous books available from commercial bookstores on the
   Unix  operating  system.  ITC has some available for checkout and will be
   glad to make recommendations. The following  book  is  available  in  the
   University bookstore:

        Grace Todino and John Strang, Learning the Unix Operating Sys-
        tem, O'Reilly & Associates, Inc.


   SOFTWARE

        The following lists show software available on one or more of  ITC's
   Unix computers.  The first list is organized by function; the second list
   is organized alphabetically by command or product name. Some of the stan-
   dard  Unix  utilities  (e.g.,  ls, cal, sed) have not been included.  For
   more information on any software, first consult the on-line  help  avail-
   able with the man command.

        See the file /help/unix/supported.software for  up-to-date  informa-
   tion on software availability.

        If the program is not available in  the  default  search  PATH,  the
   directory  in  which it resides is specified.  To access the program, put
   the directory name in your search PATH, which is a line in your  .profile
   or  .variables.ksh  file.   For more information on customizing your Unix
   environment, see document U-002.

        Programs that use the X Window System are listed in the  X  section,
   but  are  not  included in the alphabetical listing, since most are named
   x______.  There are many X programs, and we  are  constantly  adding  new
   ones.   To check for additional programs, refer to the list in the direc-
   tory /X11.5/bin.  Older programs that have  not  been  compiled  for  the
   X11.5 release can be found in the directory /X/bin/X11.

        The following abbreviations are used to distinguish between the com-
   puters whose software we list:







   U-001                      Unix Resource List                           6

                RS = RS/6000 computers
                Sun = Sun workstations (Sun4, and Solaris)
                SGI = Silicon Graphics computers
                All = RS/6000, Sun, and SGI


   List Grouped by Function

   Programs in this section have been listed under  one or more of the  fol-
   lowing headings.

      o   Communications
      o   Compiler-Related
      o   Editing
      o   GNU
      o   Graphics
      o   Mathematics, Statistics, Science and Engineering
      o   Printing
      o   Document Processing
      o   X
      o   Miscellaneous
      o   Shell Commands

   Communications
   archie      All         Search for files on the Internet
   biff        RS,Sun      Give notice of incoming mail messages
   cu          All         Connect to remote system
   download    RS,Sun      Transfer file from Unix account to remote machine
   elm         All         Interactive, screen-oriented mail system
   filter      All         Process incoming mail
   finger      All         Display information about users (Not avail. on all systems)
   ftp         All         TCP/IP file transfer protocol
   gopher      All         Internet Gopher, a distributed document delivery system
   gwis        All         Grounds-Wide Information System
   hostname    All         Display current host name
   irc         RS,Sun      Interface to the Internet Relay Chat system
   kermit      All         Kermit file transfer
   last        All         Displays information about previous logins
   lastlogin   All         Reports the lastlogin date for a user
   lynx        All         Text based World Wide Web/Internet navigation tool
   mail        All         Send and receive electronic mail (same as 'mush' on RS)
   mailreg     All         Register user with UVa mail server
   mimencode   All         Encode and decode binaries in mime format
   mosaic      All         World Wide Web/Internet navigation tool
   mush        All         Mail User's SHell mail program (default on RS)
   namtest     RS,Sun      Get machine IP address
   netscape    All         World Wide Web/Internet navigation tool (/uva/bin)
   newsgroups  All         list unsubscribed-to newsgroups
   nslookup    All         Query Internet name servers for info (/usr/etc on Suns)
   ntalk       RS,Sun      Two-user chat program
   pent        RS          Public Education Network version of the Tass news reader
   pine        All         Easy electronic mail interface (/uva/bin)
   Pnews       All         Post a message to USENET news
   procmail    RS,Sun      Process incoming mail
   rb          RS          Receive files with YMODEM protocol
   rcp         All         Copy files to remote system
   rinfo       Sun         Display the Network Status Table
   rlogin      All         Log in to remote system
   rn          All         Program to read USENET news (same as 'trn')
   rsh         All         Run shell on remote machine




   U-001                      Unix Resource List                           7

   rusers      All         Display list of users on a remote host
   rx          RS          Receive files with XMODEM protocol
   rz          RS          Receive files with ZMODEM protocol
   sb          RS          Send files with YMODEM protocol
   smalltalk   Sun         Smalltalk interpreter (/contrib/bin/smalltalk)
   sx          RS          Send files with XMODEM protocol
   sz          RS          Send files with ZMODEM protocol
   talk        All         Two-user chat program
   telnet      All         TCP/IP remote system login protocol
   tip         RS,Sun      Connect to remote system
   tn3270      RS,Sun      Full-screen remote login to IBM VM/CMS
   trn         All         Threaded read news program
   upload      RS          Transfer file from remote machine to Unix account
   uudecode    All         Decode binary file for email transmission
   uuencode    All         Encode binary file for email transmission
   uw          Sun         Multiple-window Macintosh interface to Unix (Sun3)
   vacation    All         Automatically respond to incoming mail
   whois       All         UVa and DARPA Internet user name directory service
   write       All         Send message to other users
   xbiff       All         Give notice of incoming mail in X
   xbuffy      RS,Sun      Give notice of incoming mail from multiple mailboxes in X (/contrib/bin)
   xnetlib     RS,Sun      X connection to netlib server at Oak Ridge National Lab
   ytalk       RS,Sun      Multi-user talk program
   _________________________________________________________________________



   Compiler-Related
   _________________________________________________________________________

   adb         RS,Sun      General-purpose debugger
   bison       RS          GNU Project parser generator (/contrib/bin)
   bison       Sun,SGI     GNU Project parser generator (yacc replacement) (/gnu/bin)
   bsdcc       RS          C compiler, emulates Berkeley C environment
   c89         RS          Ansi C compiler, same as xlc
   cb          All         Simple C program beautifier
   cc          All         Standard (Kernighan & Ritchie) C compiler (/usr/lang on Suns)
   CC          Sun         C++ translator
   cflow       All         Generate a flow graph for a C program
   cpp         Sun         C language preprocessor (/usr/lang on Suns)
   dbx         All         Source-level debugger (/usr/lang on Suns)
   f2c         RS          Convert Fortran 77 code to C or C++ (/contrib/bin)
   f77         RS          FORTRAN 77 compiler (with optimization)
   f77         Sun         Sun FORTRAN 77 compiler (/opt/SUNWspro/bin/f77)
   f90         Sun         Sun FORTRAN 90 compiler (/opt/SUNWspro/bin/f90)
   f90         RS          See: xlf90
   fsplit      All         Split FORTRAN source code into separate routine files
   ftn         RS          FORTRAN 77 compiler (with optimization)
   ftnchek     RS,Sun      FORTRAN semantic program checker
   g++         All         GNU project C++ compiler (/gnu/bin)
   gcc         All         GNU project Ansi C compiler (/gnu/bin)
   gdb         All         The GNU Debugger (/gnu/bin)
   gprof       Sun         Display call-graph profile data
   indent      RS,Sun      Reformats a C program
   kcl         RS,Sun      Kyoto Common Lisp
   lex         All         Lexical analysis program generator
   Linda       Sun         Parallel programming support for C and Fortran (/linda2.5.2/bin)
   lint        All         C program verifier




   U-001                      Unix Resource List                           8

   make        All         Maintain, update, and regenerate related programs and files
   makedepend  All         Create dependencies in makefiles
   nice        All         Run a command at a specified priority
   nohup       All         Run a command without hangups and quits
   pascal      RS          Pascal compiler (with optimization)
   pc          RS,Sun      Pascal compiler (with optimization)
   perl        All         Perl interpreter (/uva/bin)
   pf77        RS          FORTRAN 77 code profiling tool (/contrib/bin)
   pfill       RS          Insert data collected during profiling in F77 source (/contrib/bin)
   prof        All         Display profile data on an object file
   protoize    All         convert K&R C source code to ANSI C prototype format (/gnu/bin)
   python      RS          Python language interpreter
   sccs        RS,Sun      Source Code Control System for managing software revisions
   size        All         Display the number of bytes in an object file
   smake       RS,Sun      Utility for detecting processing directive within files
   sno         RS          SNOBOL interpreter
   unprotoize  All         convert ANSI C source code to K&R C (/gnu/bin)
   xdbx        Sun         X interface to the dbx debugger
   xlc         RS          Ansi C compiler, same as c89
   xlC         RS          C++ compiler
   xlf         RS          FORTRAN 77 compiler (no optimization)
   xlf90       RS          FORTRAN 90 compiler
   xlp         RS          Pascal compiler (no optimization)
   yacc        All         yet another compiler-compiler: parsing program generator


   Editing
   _________________________________________________________________________

   awk         All         Match patterns then perform specified actions on them
   axe         RS,Sun      Full-function X editor application (/contrib/bin)
   bed         RS          Editor for binary files
   dired       RS          Emacs-style directory editor (/contrib/bin)
   edt         RS          VMS-style editor (avery: /edt/bin)
   emacs       All         GNU project version of Emacs (/gnu/bin)
   expand      RS,Sun      Change tabs into spaces
   idraw       RS,Sun      Drawing editor; output is PostScript
   jove        All         Full-screen text editor (Jonathon's Own Version of Emacs)
   pico        All         Simple text editor (/uva/bin)
   rpl         RS          Replace all occurrences of a string in a file
   sed         All         Stream editor
   tr          All         Delete or substitute characters
   tab         RS          Change spaces into tabs
   vi          All         Full-screen text editor
   vim         All         Vi IMproved (/contrib/bin)
   vitutor     RS,Sun      Vi editor tutorial
   xedit       All         Simple text editor for X with mouse support
   xemacs      RS,Sun      GNU Emacs for X with mouse support (/gnu/bin)
   xwp         RS          Word Perfect 6.0 (/wp60/wpbin)


   GNU
   _________________________________________________________________________

   bash        RS,Sun      Bourne Again SHell (/gnu/bin)
   bison       RS          GNU Project parser generator (/contrib/bin)
   bison       Sun,SGI     GNU Project parser generator (yacc replacement) (/gnu/bin)
   cmp         RS          Compares two files (/gnu/bin)
   diff        All         Finds the difference between two text files (/gnu/bin)




   U-001                      Unix Resource List                           9

   diff3       All         Finds the difference between three text files (/gnu/bin)
   find        RS          Does a recursive directory listing with full paths (/gnu/bin)
   emacs       All         GNU project version of Emacs (/gnu/bin)
   egrep       All         Search for a fixed string in a file (/gnu/bin)
   fgrep       All         Search for a regular expression in a file (/gnu/bin)
   g77         All         GNU project Fortran 77 compiler (/gnu/bin)
   g++         All         GNU project C++ compiler (/gnu/bin)
   gcc         All         GNU project Ansi C compiler (/gnu/bin)
   gdb         All         GNU debugger (/gnu/bin)
   ghostview   All         View PostScript documents in X (/gnu/bin)
   gspell      RS          Spell checks a file (/gnu/bin)
   gnuplot     All         Interactive plotting program (/gnu/bin)
   gnutex      Sun         Interactive plotting program with LaTeX support (/gnu/bin)
   gunzip      All         GNU file expansion utility (/gnu/bin)
   gzcat       RS,Sun      GNU file expansion utility (/gnu/bin)
   gzip        All         GNU file compression utility (/gnu/bin)
   info        All         GNU texinfo program (/tex/bin)
   lasergnu    RS,Sun      Send gnuplot output to a printer (/gnu/bin)
   protoize    All         convert K&R C source code to ANSI C prototype format (/gnu/bin)
   sdiff       RS          Compare two files and display the diff side-by-side (/gnu/bin)
   unprotoize  All         convert ANSI C source code to K&R C (/gnu/bin)
   xemacs      RS,Sun      GNU Emacs for X with mouse support (/gnu/bin)
   zcmp        RS          Compare compressed files (/gnu/bin)
   zdiff       RS          Compare compressed files (/gnu/bin)
   zforce      RS          Force a .gz extension on all gzip files (/gnu/bin)
   zgrep       RS          Search possibly compressed files /gnu/bin)
   zmore       RS          Allow perusal of compressed text /gnu/bin)
   znew        RS          Recompress .Z files to .gz files /gnu/bin)


   Graphics
   _________________________________________________________________________

   add         SGI         add two images together
   cadkey      Sun         3D CADD package (/usr/cadkey)
   cadutil     Sun         CADKEY file conversion utility (/usr/cadkey/bin)
   ccomp       Sun         CADKEY Advanced Design Language compiler (/usr/cadkey/bin)
   cktutor     Sun         CADKEY interactive tutorial (/usr/local/bin/cktutor on Sun)
   dynamics    RS,Sun      Nonlinear dynamics computational graphics (/contrib /bin)
   gnuplot     All         Interactive plotting program (/gnu/bin)
   gnutex      Sun         Interactive plotting program with LaTeX support (/gnu/bin)
   gplot       All         Graphics utility for processing of CGM metafiles
   graph       RS,Sun      Draw a graph
   graph+      RS,Sun      Graph utility for plot files (/contrib/bin)
   maple       All         Symbolic mathematics processor
   Mathematica RS,Sun      Symbolic math processor (blue.unix, watt: /math/bin)
   matlab      All         Matrix, graphics and numerical computations (blue.unix, watt: /matlab)
   mpeg_play   All         Play mpeg movies (X11)
   NCAR        RS,Sun      Graphics subroutines (National Center for Atmospheric Research)
   pdraw       RS,Sun      3-D plot package for X11 and PostScript (/contrib/bin)
   ribbons     SGI         Display molecular models as rendered images
   rplot       Sun         Print a rasterized CADKEY plot file
   SAS/GRAPH   RS          Procedures to produce high-quality graphs, charts, plots
   screendump  Sun         Dump a frame-buffer image to a file
   screenload  Sun         Load a frame-buffer image from a file
   X           All         X Window System server (see list below for X programs)
   xmgr        RS          Motif data/function plotting tool (/contrib/bin)


   Mathematics, Statistics, Science and Engineering




   U-001                      Unix Resource List                          10

   _________________________________________________________________________

   abaqus      RS          Finite element analysis package (watt: /abaqus/com)
   AMBER       RS          Molecular dynamics analysis (avery, blue.unix, watt: /amber/exe)
   ansys       RS          Finite element analysis (watt: /ansys50/bin)
   arcinfo     RS          Mapping, analysis, display, and database package (ptolemy)
   BMDP        RS          Statistical package (avery, blue.unix, hobbes, poe, watt: /bmdp/bin)
   cayley      RS          Abstract algebra package (blue.unix)
   ccp4        RS          Analysis program for Biologists (blue.unix: /ccp4/bin)
   chain       SGI         Matches atomic coordinates to electron density maps
   cinema      Sun         Simulation program (sunipc-8: /sunlab/cinema-iv)
   dx          All         Data Explorer, IBM's Data Visualization tool
   EUGENE      RS          DNA/Protein Sequence Analysis Package (avery, blue.unix: /seqprg)
   FISHPAK     RS          NCAR library for solution of separable elliptic partial differential equations
   IMSL        RS          IMSL mathematical library
   imslidf     RS          IMSL Libraries Interative Documentation Facility
   imslidl     RS,Sun      Data visualization package (watt: /imslidl/bin)
   LAPACK      RS,Sun      Linear algebra routines replacing LINPACK and EISPACK
   lisrel      RS          Structural equation modeling program (avery, blue.unix, hobbes, poe, watt: /lisrel)
   maple       All         Symbolic mathematics processor
   mathematica All         Symbolic math processor (blue.unix, watt: /math/bin)
   matlab      All         Matrix, graphics and numerical computations (blue.unix, watt: /matlab)
   MOPAC       RS          Molecular orbital package (/mopac6/bin)
   mx          RS          Matrix algebra interpreter (LISREL) (/contrib/bin)
   NCAR        RS,Sun      Graphics subroutines (National Center for Atmospheric Research)
   PATRAN      RS          Engineering modeling program (watt: /patran3/bin)
   PDB         RS          Brookhaven Protein Data Base (avery, blue.unix: /pbd)
   PHYLIP      RS          Produce phylogenetic trees (avery, blue.unix: /seqprg/phylip)
   prelis      RS          Data screening program for lisrel (avery, blue.unix, poe, watt: /lisrel)
   S           RS,Sun      Statistical package and programming Language for Data Analysis and Graphics
   SAM         RS          DNA/Protein Sequence Analysis Package (avery, blue.unix: /seqprg)
   SAS         RS          Statistical package (avery, blue.unix, poe, ptolemy, watt: /sas)
   simm        SGI         A Muscle Simulation Package (/simm)
   Splus       All         Statistical package (/S+)
   SPSS        RS          Statistical package (/spss/bin)
   SUDAAN      RS          SUrvey DAta ANalysis for multi-stage sample designs ( poe: /sudaan/bin)
   SYBYL       SGI         Molecular modeling (/sgilib/sybyl/bin)
   Xplor       RS          Molecular dynamics analysis (blue.unix: /xplor/bin)


   Printing
   _________________________________________________________________________

   enscript    RS,Sun,N    Print text files on PostScript printer; some formatting options
   envel       RS,Sun      Address an envelope on Apple Laser Writer II
   ghostview   All         View PostScript documents in X (/gnu/bin)
   lpq         All         Examine the spool queue to a printer
   lpr         All         Send output to printer
   lprm        All         Remove specified job from the spool queue
   macps       Sun         Print Macintosh-created PostScript file on Unix
   manpage     RS,Sun      Print a manual page on an Apple LaserWriter
   mpage       RS,Sun      Print multiple pages per sheet on a PostScript printer
   pl          RS          Print local (print to your local printer)
   psras       Sun         Convert Sun rasterfile(5) to PostScript
   psroff      RS,Sun      Process Troff input and send to PostScript printer


   Document Processing
   _________________________________________________________________________





   U-001                      Unix Resource List                          11

   addbib      RS,Sun      Create or add to bibliographic database
   afm2tfm     All         Convert Adobe Font Metric to TeX Font Metric
   amslatex    All         American Mathematical Society LaTeX
   amstex      All         American Mathematical Society TeX
   bib         RS,Sun      Bibliographic formatter (part of Troff package)
   bibtex      All         Make a LaTeX bibliography
   cmmf        All         Computer Modern Metafont
   diction     RS          Finds bad or wordy sentences
   ditroff     Sun         Device-independent Troff; called Troff at UVa (see psroff)
   dvips       All         Convert a TeX DVI file to PostScript commands
   dviselect   Sun         Extract pages from DVI files
   dvitype     All         Translate a DVI file for humans to read
   envel       RS,Sun      Address an envelope on Apple Laser Writer II
   eqn         RS,Sun      Mathematics formatter; pre-processor to Troff
   explain     RS          Interactive thesaurus for phrases found by ``diction''
   f2p         All         fig to pic translator (X11)
   f2ps        All         fig to PostScript translator (X11)
   fig         Sun         Facility for Interactive Generation of figures
   frame       RS          Document formatter
   ghostview   All         View PostScript documents in X (/gnu/bin)
   gnutex      Sun         Interactive plotting program with LaTeX support (/gnu/bin)
   grap        RS,Sun      Pic preprocessor for drawing graphs
   hyphen      RS,Sun      Find hyphenated words ending lines
   info        All         GNU texinfo program (/tex/bin)
   ispell      All         Interactive spelling checker
   latex       All         Leslie Lamport's TeX
   listrefs    RS          List bibliographic references (see bib)
   macref      RS,Sun      Print cross reference list of troff macro files
   ndx         RS,Sun      Create subject-page index for a document
   pic         RS,Sun      Line drawing pre-processor to Troff
   psfig       RS,Sun      Troff and LaTeX preprocessor for PostScript figures
   psroff      RS,Sun      Process Troff input and send to PostScript printer
   ptx         RS,Sun      Produce permuted index for troff
   refer       RS,Sun      Literature reference package for Troff
   roffbib     RS,Sun      Format and print a bibliographic database
   spell       All         Spelling checker
   style       RS          Analyze characteristics of text
   subj        RS          Generate list of subjects from a document
   tbl         RS,Sun      Table formatter; pre-processor to Troff
   tex         All         A text formatting program
   texsis      All         TeX formatting macros for physics papers (Sun3)
   texspell    RS,Sun      Find spelling errors in TeX documents
   tib         RS          Process reference and citation entries for TeX documents
   tr2latex    All         troff to LaTeX converter
   troff       RS,Sun      Text formatter (device-independent Troff); see psroff
   xtex        Sun         View DVI files on X Windows display
   xtroff      RS,Sun      Troff previewer for X windows
   xwp         RS          Word Perfect 6.0 (/wp60/wpbin)


   X
   _________________________________________________________________________

   4Dwm        SGI         4Dwm Window Manager
   animate     RS,Sun      Display a sequence of images on a workstation runing X
   appres      All         List an application program's resources
   atobm       All         Convert ascii strings to bitmap file
   axe         RS,Sun      Full-function X editor application (/contrib/bin)
   bdftopcf    All         BDF to PCF font compiler for X (X11)
   bdftosnf    Sun,SGI     BDF to SNF font compiler for X (X11)




   U-001                      Unix Resource List                          12

   bitmap      All         Rudimentary bitmap editor
   bmtoa       All         Convert bitmap file to ascii strings
   cxterm      RS,Sun      Chinese language xterm
   display     RS,Sun      Display an image in X Windows
   editres     All         Dynamic resource editor for X Toolkit applications
   exclaim     RS          Spreadsheet package for X (/rs6000/qsp/bin.rs6000)
   f2p         All         fig to pic translator (X11)
   f2ps        All         fig to PostScript translator (X11)
   ghostview   All         View PostScript documents in X (/gnu/bin)
   ical        RS          X windows Calendar program with alarms (/contrib/bin)
   ico         All         Animate an icosahedron or other polyhedron
   idraw       RS,Sun      Drawing editor; output is PostScript
   imake       All         C preprocessor interface to the make utility
   listres     All         Generate a list of a widget's resources
   makedepend  All         Create dependencies in makefiles
   montage     RS,Sun      Create a composite image from several images
   mosaic      All         World Wide Web/Internet navigation tool
   mpeg_play   All         Play mpeg movies (X11)
   mwm         All         Motif window manager for X
   rxvt        RS          Color xterm (/contrib/bin)
   startx      All         Invoke X windows
   tvtwm       All         Tom's Virtual Tab Window Manager for X windows
   twm         All         Tom's window manager for X
   xalarm      RS,Sun      Alarm clock for X
   xarchie     RS,Sun      X version of Archie; information on Internet files available for ftp
   xauth       All         Server access control program for X
   xbiff       All         Give notice of incoming mail in X
   xbuffy      RS,Sun      Give notice of incoming mail from multiple mailboxes in X (/contrib/bin)
   xcal        RS,Sun      Interactive calendar with a notebook for X
   xcalc       All         Scientific calculator for X
   xcalendar   All         Calendar program with notebook for X
   xclipboard  All         X clipboard client
   xclock      All         Analog / digital clock for X
   xcolors     RS,Sun      Display color names and colors (/contrib/bin)
   xdbx        Sun         X interface to the dbx debugger
   xditview    All         Display ditroff DVI files
   xdpr        All         Dump an X window directly to a printer
   xdpyinfo    All         Display information utility for X
   xdu         RS,Sun      Display output of du as a graphical tree (/contrib/bin)
   xdvi        All         DVI previewer for X
   xedit       All         Simple text editor for X with mouse support
   xemacs      RS,Sun      GNU Emacs for X with mouse support (/gnu/bin)
   xeyes       RS          Eyes which follow the cursor around
   xfd         All         Font displayer for X
   xfig        All         Facility for Interactive Generation of figures under X
   xfish       Sun         Aquarium background with swimming fish (X11)
   xfontsel    All         X font selector
   xgas        RS,Sun      Animated simulation of an ideal gas
   xgc         All         X graphics demo
   xgopher     RS,Sun      Gopher information server for X
   xgwis       RS,Sun      Grounds-Wide Information System for X
   xhost       All         Server access control program for X
   xinit       All         X window system initializer
   xldb        RS          X interface to the dbx debugger
   xloadimage  RS,Sun      Load images into X window
   xlogo       All         X window system logo
   xlsclients  All         List client applications running on a display (X)
   xlsfonts    All         Server font list displayer for X
   xlswins     All         Server window list displayer for X (X11)
   xmag        All         Magnify parts of the screen (X)




   U-001                      Unix Resource List                          13

   xmail       RS,Sun      X visual interface to mail program
   xman        All         Manual page display program for the X window system
   xmgr        RS          Motif data/function plotting tool (/contrib/bin)
   xmh         All         X interface to the MH message handling system
   xmkmf       All         Make makefile from imake file
   xmodmap     All         Utility for modifying keymaps in X
   xmx         RS          X protocol multiplexer
   xnetlib     RS,Sun      X connection to netlib server at Oak Ridge National Lab
   xperfmon    Sun         Display some system statistics as a set of line graphs
   xplaces     RS,Sun      Snapshot of personal X window configuration
   xpr         All         Print an X window dump
   xprop       All         X displayer of window and font properties
   xps         Sun         X PostScript Viewer
   xrdb        All         X server resource database utility
   xrefresh    All         Refresh all or part of an X screen
   xrn         RS,Sun      X-based interface to USENET news system
   xset        All         Set various user preference options of the X display
   xsetbg      RS,Sun      Load images into X window
   xsetroot    All         Root window parameter setting utility for X
   xsol        RS          Play solitaire similar to Klondike
   xspread     RS,Sun      X version of sc spreadsheet (/contrib/bin)
   xstdcmap    All         X standard colormap utility
   xterm       All         Terminal emulator for X
   xtex        Sun         View DVI files on X Windows display
   xtiff       RS          View a TIFF file in an X window
   xtimex      RS          Keep track of project time
   XtoPS       RS,Sun      Dump an image of an X window to encapsulated PostScript
   xtpanel     RS,Sun      Quick X interface builder
   xtpanel-examples        RS,SunExamples for xtpanel
   xtpanel-generator       RS,SunInterface to xtpanel interface builder
   xtroff      RS,Sun      Troff previewer for X windows
   xv          All         Image viewer for GIF, TIFF, JPEG, X11 and other files
   xview       RS,Sun      Load images into X window
   xwd         All         Dump an image of an X window
   xwp         RS          Word Perfect 6.0 (/wp60/wpbin)
   xwebster    RS,Sun      X version of word look-up in on-line Webster dictionary
   xwininfo    All         Window information utility for X
   xwsh        SGI         X Window Shell
   xwud        All         Image displayer for X


   Miscellaneous
   _________________________________________________________________________

   a2p         All         Awk to perl translator
   answerbook  Sun         Sun Microsystem's interactive help facility
   arc         RS          General archive and file compression utility
   banner      All         Put character string to large letters to standard output
   calendar    All         Sends reminder messages to user on a daily basis
   calc        RS          A command line calculator
   compress    All         Reduce the size of a file using adaptive Lempel-Zev coding
   cut         All         Cut a selected portion of lines from a file
   exclaim     RS          Spreadsheet package for X (/rs6000/qsp/bin.rs6000)
   expect      All         Scripting language for interaction with other programs
   flip        RS          Convert between MS-DOS and Unix file formats
   floppy      Sun         Read a DOS floppy disk on a Sun
   gradebook   RS,Sun      Suite of grade manipulation packages (gnew, gtype, ghist, gsort, gletter)
   gunzip      All         GNU file expansion utility (/gnu/bin)
   gzcat       RS,Sun      GNU file expansion utility (/gnu/bin)
   gzip        All         GNU file compression utility (/gnu/bin)




   U-001                      Unix Resource List                          14

   imslidf     RS          IMSL Libraries Interative Documentation Facility
   indent      RS,Sun      Reformats a C program
   info        RS          IBM's interactive documentation facility (/usr/bin/info)
   itcnews     All         Display ITC Notices
   less        RS,Sun      Paging program similar to more, but additional features
   paste       All         Concatenate corresponding lines of files
   pcal        RS,Sun      PostScript calendar tool (/contrib/bin)
   rgrep       All         Recursively grep for a string
   rolo        RS,Sun      On-line rolodex for keeping information on people
   rperf       RS,Sun      Performance monitor utility (/contrib/bin)
   s2p         All         Sed to perl translator
   sc          RS,Sun      Spreadsheet program
   script      All         Create log file of terminal session
   sleep       All         Cause computer to wait
   smake       RS,Sun      Utility for detecting processing directives within files
   TERN        RS          Teacher Education Resource Network (curry: /tern)
   tfm         Sun4        Trivial file manager (/contrib/bin)
   ts          RS          Test-scoring program
   uncompress  All         Restore file previously-compressed with compress command
   units       All         Convert from one unit of measure to another
   unix2dos    Sun         convert text file from ISO format to DOS format
   unzip       All         List/test/extract from a ZIP archive file
   uptime      RS,Sun      Shows how long the system has been up
   webster     RS,Sun      Look up word in on-line Webster dictionary
   zip         All         Package and compress (archive) files
   zoo         RS,Sun      Manipulate archives of files in compressed form


   Shell Commands
   _________________________________________________________________________

   bash        RS,Sun      GNU Bourne-Again Shell (/gnu/bin)
   chsh        RS          Change default login shell
   chfn        RS          Change full name information
   cmp         All         Compare two files
   csh         All         Invoke the C shell
   date        All         Display or set the date
   diff        All         Compare text files
   env         All         Display the current environment
   find        All         Recursive search for named file
   ksh         All         Invoke the Korn shell
   sh          All         Invoke the standard Unix (Bourne) shell
   tcsh        All         Invoke the C shell with file completion and command-line editing
   zsh         RS          Invoke the Z shell (/contrib/bin)




   Name        Machine     Function
   _________________________________________________________________________

   4Dwm        SGI         4Dwm Window Manager
   a2p         All         Awk to perl translator
   abaqus      RS          Finite element analysis package (watt: /abaqus/com)
   adb         RS,Sun      General-purpose debugger
   add         SGI         add two images together
   addbib      RS,Sun      Create or add to bibliographic database
   afm2tfm     All         Convert Adobe Font Metric to TeX Font Metric
   AMBER       RS          Molecular dynamics analysis (avery, blue.unix, watt: /amber/exe)
   amslatex    All         American Mathematical Society LaTeX




   U-001                      Unix Resource List                          15

   amstex      All         American Mathematical Society TeX
   animate     RS,Sun      Display a sequence of images on a workstation runing X
   answerbook  Sun         Sun Microsystem's interactive help facility
   ansys       RS          Finite element analysis (watt: /ansys50/bin)
   appres      All         List an application program's resources
   arc         RS          General archive and file compression utility
   archie      All         Search for files on the Internet
   arcinfo     RS          Mapping, analysis, display, and database package (ptolemy)
   atobm       All         Convert ascii strings to bitmap file
   awk         All         Match patterns then perform specified actions on them
   axe         RS,Sun      Full-function X editor application (/contrib/bin)
   banner      All         Put character string to large letters to standard output
   bash        RS,Sun      GNU Bourne-Again Shell (/gnu/bin)
   bdftopcf    All         BDF to PCF font compiler for X (X11)
   bdftosnf    Sun,SGI     BDF to SNF font compiler for X (X11)
   bed         RS          Editor for binary files
   bib         RS,Sun      Bibliographic formatter (part of Troff package)
   bibtex      All         Make a LaTeX bibliography
   biff        RS,Sun      Give notice of incoming mail messages
   bison       RS          GNU Project parser generator (/contrib/bin)
   bison       Sun,SGI     GNU Project parser generator (yacc replacement) (/gnu/bin)
   bitmap      All         Rudimentary bitmap editor
   BMDP        RS          Statistical package (avery, blue.unix, hobbes, poe, watt: /bmdp/bin)
   bmtoa       All         Convert bitmap file to ascii strings
   bsdcc       RS          C compiler, emulates Berkeley C environment
   c89         RS          Ansi C compiler, same as xlc
   cadkey      Sun         3D CADD package (/usr/cadkey)
   cadutil     Sun         CADKEY file conversion utility (/usr/cadkey/bin)
   calc        RS          A command line calculator
   calendar    All         Sends reminder messages to user on a daily basis
   cayley      RS          Abstract algebra package (blue.unix)
   cb          All         Simple C program beautifier
   cc          All         Standard (Kernighan & Ritchie) C compiler (/usr/lang on Suns)
   CC          Sun         C++ translator
   ccomp       Sun         CADKEY Advanced Design Language compiler (/usr/cadkey/bin)
   ccp4        RS          Analysis program for Biologists (blue.unix: /ccp4/bin)
   cflow       All         Generate a flow graph for a C program
   chain       SGI         Matches atomic coordinates to electron density maps
   chfn        RS          Change full name information
   chsh        RS          Change default login shell
   cinema      Sun         Simulation program (sunipc-8: /sunlab/cinema-iv)
   cktutor     Sun         CADKEY interactive tutorial (/usr/local/bin/cktutor on Sun)
   cmmf        All         Computer Modern Metafont
   cmp         All         Compare two files
   compress    All         Reduce the size of a file using adaptive Lempel-Zev coding
   cpp         Sun         C language preprocessor (/usr/lang on Suns)
   csh         All         Invoke the C shell
   cu          All         Connect to remote system
   cut         All         Cut a selected portion of lines from a file
   cxterm      RS,Sun      Chinese language xterm
   date        All         Display or set the date
   dbx         All         Source-level debugger (/usr/lang on Suns)
   diction     RS          Finds bad or wordy sentences
   diff        All         Finds the difference between two text files (/gnu/bin)
   diff3       All         Finds the difference between three text files (/gnu/bin)
   dired       RS          Emacs-style directory editor (/contrib/bin)
   display     RS,Sun      Display an image in X Windows
   ditroff     Sun         Device-independent Troff; called Troff at UVa (see psroff)
   download    RS,Sun      Transfer file from Unix account to remote machine
   dvips       All         Convert a TeX DVI file to PostScript commands




   U-001                      Unix Resource List                          16

   dviselect   Sun         Extract pages from DVI files
   dvitype     All         Translate a DVI file for humans to read
   dx          All         Data Explorer, IBM's Data Visualization tool
   dynamics    RS,Sun      Nonlinear dynamics computational graphics (/contrib /bin)
   editres     All         Dynamic resource editor for X Toolkit applications
   edt         RS          VMS-style editor (avery: /edt/bin)
   egrep       All         Search for a fixed string in a file (/gnu/bin)
   elm         All         Interactive, screen-oriented mail system
   emacs       All         GNU project version of Emacs (/gnu/bin)
   enscript    RS,Sun      Print text files on PostScript printer; some formatting options
   env         All         Display the current environment
   envel       RS,Sun      Address an envelope on Apple Laser Writer II
   eqn         RS,Sun      Mathematics formatter; pre-processor to Troff
   EUGENE      RS          DNA/Protein Sequence Analysis Package (avery, blue.unix: /seqprg)
   exclaim     RS          Spreadsheet package for X (/rs6000/qsp/bin.rs6000)
   expand      RS,Sun      Change tabs into spaces
   expect      All         Scripting language for interaction with other programs
   explain     RS          Interactive thesaurus for phrases found by ``diction''
   f2c         RS          Convert Fortran 77 code to C or C++ (/contrib/bin)
   f2p         All         fig to pic translator (X11)
   f2ps        All         fig to PostScript translator (X11)
   f77         RS,Sun      FORTRAN 77 compiler (with optimization)
   f90         RS          See: xlf90
   f90         Sun         Sun FORTRAN 90 compiler (/opt/SUNWspro/bin/f90)
   fgrep       All         Search for a regular expression in a file (/gnu/bin)
   fig         Sun         Facility for Interactive Generation of figures
   filter      All         Process incoming mail
   find        All         Recursive search for named file
   finger      All         Display information about users
   FISHPAK     RS          NCAR library for solution of separable elliptic partial differential equations
   flip        RS          Convert between MS-DOS and Unix file formats
   floppy      Sun         Read a DOS floppy disk on a Sun
   frame       RS          Document formatter
   fsplit      All         Split FORTRAN source code into separate routine files
   ftn         RS          FORTRAN 77 compiler (with optimization)
   ftnchek     RS,Sun      FORTRAN semantic program checker
   ftp         All         TCP/IP file transfer protocol
   g++         All         GNU project C++ compiler (/gnu/bin)
   g77         All         GNU project Fortran 77 compiler (/gnu/bin)
   gcc         All         GNU project Ansi C compiler (/gnu/bin)
   gdb         All         The GNU Debugger (/gnu/bin)
   ghostview   All         View PostScript documents in X (/gnu/bin)
   gnuplot     All         Interactive plotting program (/gnu/bin)
   gnutex      Sun         Interactive plotting program with LaTeX support (/gnu/bin)
   gopher      All         Internet Gopher, a distributed document delivery system
   gplot       All         Graphics utility for processing of CGM metafiles
   gprof       Sun         Display call-graph profile data
   gradebook   RS,Sun      Suite of grade manipulation packages (gnew, gtype, ghist, gsort, gletter)
   grap        RS,Sun      Pic preprocessor for drawing graphs
   graph       RS,Sun      Draw a graph
   graph+      RS,Sun      Graph utility for plot files (/contrib/bin)
   gspell      RS          Spell checks a file (/gnu/bin)
   gunzip      All         GNU file expansion utility (/gnu/bin)
   gwis        All         Grounds-Wide Information System
   gzcat       RS,Sun      GNU file expansion utility (/gnu/bin)
   gzip        All         GNU file compression utility (/gnu/bin)
   hostname    All         Display current host name
   hyphen      RS,Sun      Find hyphenated words ending lines
   ical        RS          X windows Calendar program with alarms (/contrib/bin)
   ico         All         Animate an icosahedron or other polyhedron




   U-001                      Unix Resource List                          17

   idraw       RS,Sun      Drawing editor; output is PostScript
   imake       All         C preprocessor interface to the make utility
   IMSL        RS          IMSL mathematical library
   imslidf     RS          IMSL Libraries Interative Documentation Facility
   indent      RS,Sun      Reformats a C program
   info        All         GNU texinfo program (/tex/bin)
   info        RS          IBM's interactive documentation facility (/usr/bin/info)
   irc         RS,Sun      Interface to the Internet Relay Chat system
   ispell      All         Interactive spelling checker
   itcnews     All         Display ITC Notices
   jove        All         Full-screen text editor (Jonathon's Own Version of Emacs)
   kcl         RS,Sun      Kyoto Common Lisp
   kermit      All         Kermit file transfer
   ksh         All         Invoke the Korn shell
   LAPACK      RS,Sun      Linear algebra routines replacing LINPACK and EISPACK
   lasergnu    RS,Sun      Send gnuplot output to a printer (/gnu/bin)
   last        All         Displays information about previous logins
   lastlogin   All         Reports the lastlogin date for a user
   latex       All         Leslie Lamport's TeX
   less        RS,Sun      Paging program similar to more, but additional features
   lex         All         Lexical analysis program generator
   Linda       Sun         Parallel programming support for C and Fortran (/linda2.5.2/bin)
   lint        All         C program verifier
   lisrel      RS          Structural equation modeling program (avery, blue.unix, hobbes, poe, watt: /lisrel)
   listrefs    RS          List bibliographic references (see bib)
   listres     All         Generate a list of a widget's resources
   lpq         All         Examine the spool queue to a printer
   lpr         All         Send output to printer
   lprm        All         Remove specified job from the spool queue
   lynx        All         Text based World Wide Web/Internet navigation tool
   macps       Sun         Print Macintosh-created PostScript file on Unix
   macref      RS,Sun      Print cross reference list of troff macro files
   mail        All         Send and receive electronic mail (same as 'mush' on RS)
   mailreg     All         Register user with UVa mail server
   make        All         Maintain, update, and regenerate related programs and files
   makedepend  All         Create dependencies in makefiles
   manpage     RS,Sun      Print a manual page on an Apple LaserWriter
   maple       All         Symbolic mathematics processor
   mathematica All         Symbolic math processor (blue.unix, watt: /math/bin)
   matlab      All         Matrix, graphics and numerical computations (blue.unix, watt: /matlab)
   montage     RS,Sun      Create a composite image from several images
   MOPAC       RS          Molecular orbital package (/mopac6/bin)
   mosaic      All         World Wide Web/Internet navigation tool
   mpage       RS,Sun      Print multiple pages per sheet on a PostScript printer
   mpeg_play   All         Play mpeg movies (X11)
   mush        All         Mail User's SHell mail program (default on RS)
   mwm         All         Motif window manager for X
   mx          RS          Matrix algebra interpreter (LISREL) (/contrib/bin)
   namtest     RS,Sun      Get machine IP address
   NCAR        RS,Sun      Graphics subroutines (National Center for Atmospheric Research)
   ndx         RS,Sun      Create subject-page index for a document
   netscape    All         World Wide Web/Internet navigation tool (/uva/bin)
   newsgroups  All         list unsubscribed-to newsgroups
   nice        All         Run a command at a specified priority
   nohup       All         Run a command without hangups and quits
   nslookup    All         Query Internet name servers for info (/usr/etc on Suns)
   ntalk       RS,Sun      Two-user chat program
   pascal      RS          Pascal compiler (with optimization)
   paste       All         Concatenate corresponding lines of files
   PATRAN      RS          Engineering modeling program (watt: /patran3/bin)




   U-001                      Unix Resource List                          18

   pc          RS,Sun      Pascal compiler (with optimization)
   pcal        RS,Sun      PostScript calendar tool (/contrib/bin)
   PDB         RS          Brookhaven Protein Data Base (avery, blue.unix: /pbd)
   pdraw       RS,Sun      3-D plot package for X11 and PostScript (/contrib/bin)
   pent        RS          Public Education Network version of the Tass news reader
   perl        All         Perl interpreter (/uva/bin)
   pf77        RS          FORTRAN 77 code profiling tool (/contrib/bin)
   pfill       RS          Insert data collected during profiling in F77 source (/contrib/bin)
   PHYLIP      RS          Produce phylogenetic trees (avery, blue.unix: /seqprg/phylip)
   pic         RS,Sun      Line drawing pre-processor to Troff
   pico        All         Simple text editor (/uva/bin)
   pine        All         Easy electronic mail interface (/uva/bin)
   pl          RS          Print local (print to your local printer)
   Pnews       All         Post a message to USENET news
   prelis      RS          Data screening program for lisrel (avery, blue.unix, poe, watt: /lisrel)
   procmail    RS,Sun      Process incoming mail
   prof        All         Display profile data on an object file
   protoize    All         convert K&R C source code to ANSI C prototype format (/gnu/bin)
   psfig       RS,Sun      Troff and LaTeX preprocessor for PostScript figures
   psras       Sun         Convert Sun rasterfile(5) to PostScript
   psroff      RS,Sun      Process Troff input and send to PostScript printer
   ptx         RS,Sun      Produce permuted index for troff
   python      RS          Python language interpreter
   rb          RS          Receive files with YMODEM protocol
   rcp         All         Copy files to remote system
   refer       RS,Sun      Literature reference package for Troff
   rgrep       All         Recursively grep for a string
   ribbons     SGI         Display molecular models as rendered images
   rinfo       Sun         Display the Network Status Table
   rlogin      All         Log in to remote system
   rn          All         Program to read USENET news (same as 'trn')
   roffbib     RS,Sun      Format and print a bibliographic database
   rolo        RS,Sun      On-line rolodex for keeping information on people
   rperf       RS,Sun      Performance monitor utility (/contrib/bin)
   rpl         RS          Replace all occurrences of a string in a file
   rplot       Sun         Print a rasterized CADKEY plot file
   rsh         All         Run shell on remote machine
   rusers      All         Display list of users on a remote host
   rx          RS          Receive files with XMODEM protocol
   rxvt        RS          Color xterm (/contrib/bin)
   rz          RS          Receive files with ZMODEM protocol
   S           RS,Sun      Statistical package and programming Language for Data Analysis and Graphics
   s2p         All         Sed to perl translator
   SAM         RS          DNA/Protein Sequence Analysis Package (avery, blue.unix: /seqprg)
   SAS         RS          Statistical package (avery, blue.unix, poe, ptolemy, watt: /sas)
   SAS/GRAPH   RS          Procedures to produce high-quality graphs, charts, plots
   sb          RS          Send files with YMODEM protocol
   sc          RS,Sun      Spreadsheet program
   sccs        RS,Sun      Source Code Control System for managing software revisions
   screendump  Sun         Dump a frame-buffer image to a file
   screenload  Sun         Load a frame-buffer image from a file
   script      All         Create log file of terminal session
   sdiff       RS          Compare two files and display the diff side-by-side (/gnu/bin)
   sed         All         Stream editor
   sh          All         Invoke the standard Unix (Bourne) shell
   simm        SGI         A Muscle Simulation Package (/simm)
   size        All         Display the number of bytes in an object file
   sleep       All         Cause computer to wait
   smake       RS,Sun      Utility for detecting processing directive within files
   smalltalk   Sun         Smalltalk interpreter (/contrib/bin/smalltalk)




   U-001                      Unix Resource List                          19

   sno         RS          SNOBOL interpreter
   spell       All         Spelling checker
   Splus       All         Statistical package (/S+)
   SPSS        RS          Statistical package (/spss/bin)
   startx      All         Invoke X windows
   style       RS          Analyze characteristics of text
   subj        RS          Generate list of subjects from a document
   SUDAAN      RS          SUrvey DAta ANalysis for multi-stage sample designs ( poe: /sudaan/bin)
   sx          RS          Send files with XMODEM protocol
   SYBYL       SGI         Molecular modeling (/sgilib/sybyl/bin)
   sz          RS          Send files with ZMODEM protocol
   tab         RS          Change spaces into tabs
   talk        All         Two-user chat program
   tbl         RS,Sun      Table formatter; pre-processor to Troff
   tcsh        All         Invoke the C shell with file completion and command-line editing
   telnet      All         TCP/IP remote system login protocol
   TERN        RS          Teacher Education Resource Network (curry: /tern)
   tex         All         A text formatting program
   texsis      All         TeX formatting macros for physics papers (Sun3)
   texspell    RS,Sun      Find spelling errors in TeX documents
   tfm         RS,Sun      Trivial file manager (/contrib/bin)
   tib         RS          Process reference and citation entries for TeX documents
   tip         RS,Sun      Connect to remote system
   tn3270      RS,Sun      Full-screen remote login to IBM VM/CMS
   tr          All         Delete or substitute characters
   tr2latex    All         troff to LaTeX converter
   trn         All         Threaded read news program
   troff       RS,Sun      Text formatter (device-independent Troff); see psroff
   ts          RS          Test-scoring program
   tvtwm       All         Tom's Virtual Tab Window Manager for X windows
   twm         All         Tom's window manager for X
   uncompress  All         Restore file previously-compressed with compress command
   units       All         Convert from one unit of measure to another
   unix2dos    Sun         convert text file from ISO format to DOS format
   unprotoize  All         convert ANSI C source code to K&R C (/gnu/bin)
   unzip       All         List/test/extract from a ZIP archive file
   upload      RS          Transfer file from remote machine to Unix account
   uptime      RS,Sun      Shows how long the system has been up
   uudecode    All         Decode binary file for email transmission
   uuencode    All         Encode binary file for email transmission
   uw          Sun         Multiple-window Macintosh interface to Unix (Sun3)
   vacation    All         Automatically respond to incoming mail
   vi          All         Full-screen text editor
   vim         All         Vi IMproved (/contrib/bin)
   vitutor     RS,Sun      Vi editor tutorial
   webster     RS,Sun      Look up word in on-line Webster dictionary
   whois       All         UVa and DARPA Internet user name directory service
   write       All         Send message to other users
   X           All         X Window System server (see list below for X programs)
   xalarm      RS,Sun      Alarm clock for X
   xarchie     RS,Sun      X version of Archie; information on Internet files available for ftp
   xauth       All         Server access control program for X
   xbiff       All         Give notice of incoming mail in X
   xbuffy      RS,Sun      Give notice of incoming mail from multiple mailboxes in X (/contrib/bin)
   xcal        RS,Sun      Interactive calendar with a notebook for X
   xcalc       All         Scientific calculator for X
   xcalendar   All         Calendar program with notebook for X




   U-001                      Unix Resource List                          20

   xclipboard  All         X clipboard client
   xclock      All         Analog / digital clock for X
   xcolors     RS,Sun      Display color names and colors (/contrib/bin)
   xdbx        Sun         X interface to the dbx debugger
   xditview    All         Display ditroff DVI files
   xdpr        All         Dump an X window directly to a printer
   xdpyinfo    All         Display information utility for X
   xdu         RS,Sun      Display output of du as a graphical tree (/contrib/bin)
   xdvi        All         DVI previewer for X
   xedit       All         Simple text editor for X with mouse support
   xemacs      RS,Sun      GNU Emacs for X with mouse support (/gnu/bin)
   xeyes       RS          Eyes which follow the cursor around
   xfd         All         Font displayer for X
   xfig        All         Facility for Interactive Generation of figures under X
   xfish       Sun         Aquarium background with swimming fish (X11)
   xfontsel    All         X font selector
   xgas        RS,Sun      Animated simulation of an ideal gas
   xgc         All         X graphics demo
   xgopher     RS,Sun      Gopher information server for X
   xgwis       RS,Sun      Grounds-Wide Information System for X
   xhost       All         Server access control program for X
   xinit       All         X window system initializer
   xlc         RS          Ansi C compiler, same as c89
   xlC         RS          C++ compiler
   xldb        RS          X interface to the dbx debugger
   xlf         RS          FORTRAN 77 compiler (no optimization)
   xlf90       RS          FORTRAN 90 compiler
   xloadimage  RS,Sun      Load images into X window
   xlogo       All         X window system logo
   xlp         RS          Pascal compiler (no optimization)
   xlsclients  All         List client applications running on a display (X)
   xlsfonts    All         Server font list displayer for X
   xlswins     All         Server window list displayer for X (X11)
   xmag        All         Magnify parts of the screen (X)
   xmail       RS,Sun      X visual interface to mail program
   xman        All         Manual page display program for the X window system
   xmgr        RS          Motif data/function plotting tool (/contrib/bin)
   xmgr        RS          Motif data/function plotting tool (/contrib/bin)
   xmh         All         X interface to the MH message handling system
   xmkmf       All         Make makefile from imake file
   xmodmap     All         Utility for modifying keymaps in X
   xmx         RS          X protocol multiplexer
   xnetlib     RS,Sun      X connection to netlib server at Oak Ridge National Lab
   xperfmon    Sun         Display some system statistics as a set of line graphs
   xplaces     RS,Sun      Snapshot of personal X window configuration
   Xplor       RS          Molecular dynamics analysis (blue.unix: /xplor/bin)
   xpr         All         Print an X window dump
   xprop       All         X displayer of window and font properties
   xps         Sun         X PostScript Viewer
   xrdb        All         X server resource database utility
   xrefresh    All         Refresh all or part of an X screen
   xrn         RS,Sun      X-based interface to USENET news system
   xset        All         Set various user preference options of the X display
   xsetbg      RS,Sun      Load images into X window
   xsetroot    All         Root window parameter setting utility for X
   xsol        RS          Play solitaire similar to Klondike
   xspread     RS,Sun      X version of sc spreadsheet (/contrib/bin)
   xstdcmap    All         X standard colormap utility
   xterm       All         Terminal emulator for X
   xtex        Sun         View DVI files on X Windows display




   U-001                      Unix Resource List                          21

   xtiff       RS          View a TIFF file in an X window
   xtimex      RS          Keep track of project time
   XtoPS       RS,Sun      Dump an image of an X window to encapsulated PostScript
   xtpanel     RS,Sun      Quick X interface builder
   xtpanel-examples        RS,SunExamples for xtpanel
   xtpanel-generator       RS,SunInterface to xtpanel interface builder
   xtroff      RS,Sun      Troff previewer for X windows
   xv          All         Image viewer for GIF, TIFF, JPEG, X11 and other files
   xview       RS,Sun      Load images into X window
   xwd         All         Dump an image of an X window
   xwebster    RS,Sun      X version of word look-up in on-line Webster dictionary
   xwininfo    All         Window information utility for X
   xwp         RS          Word Perfect 6.0 (/wp60/wpbin)
   xwsh        SGI         X Window Shell
   xwud        All         Image displayer for X
   yacc        All         yet another compiler-compiler: parsing program generator
   ytalk       RS,Sun      Multi-user talk program
   zcmp        RS          Compare compressed files (/gnu/bin)
   zdiff       RS          Compare compressed files (/gnu/bin)
   zforce      RS          Force a .gz extension on all gzip files (/gnu/bin)
   zgrep       RS          Search possibly compressed files /gnu/bin)
   zip         All         Package and compress (archive) files
   zmore       RS          Allow perusal of compressed text /gnu/bin)
   znew        RS          Recompress .Z files to .gz files /gnu/bin)
   zoo         RS,Sun      Manipulate archives of files in compressed form
   zsh         RS          Invoke the Z shell (/contrib/bin)


   jhd5c/cpr4k/sa2b/mas8y/November 21, 1997

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